Home > R Error > R Cmd Install Dependencies

R Cmd Install Dependencies


more stack exchange communities company blog Stack Exchange Inbox Reputation and Badges sign up log in tour help Tour Start here for a quick overview of the site Help Center Detailed This would update your already installed version to the latest. The following information may help to resolve the situation: The following packages have unmet dependencies: libgdal-dev : Depends: libpq-dev but it is not going to be installed Depends: libsqlite3-dev but it Why do neural network researchers care about epochs?

I got errors from apt-get install libssl-dev/unstable E: Release 'unstable' for 'libssl-dev' was not found\ from apt-get install -t unstable libgdal-dev E: The value 'unstable' is invalid for APT::Default-Release as such My DESCRIPTION file contains the line: Depends: bar When package foo is ready for testing, I install it locally using: R CMD INSTALL foo_1.0.tar.gz However, if bar is not installed, I rocker-org member eddelbuettel commented May 11, 2015 Try this apt-get install libssl-dev/unstable or you could install the git2r .deb binary from my ad-hoc PPA on launchpad. Thank you.

R Cmd Install Dependencies

Do you have package RcppEigen installed?? Other R packages dependencies I was able to install discovering what package provides it and installing it via apt-get. share|improve this answer answered Mar 10 at 21:53 j_houg 31126 add a comment| up vote 1 down vote Download the newest version of r-base (3.2.2) from [http://cran.es.r-project.org/bin/linux/ubuntu/trusty/] use Ubuntu software Centre Since none of those dependencies are local, they aren't found and won't be installed.

  • Gábor Csárdi Threaded Open this post in threaded view ♦ ♦ | Report Content as Inappropriate ♦ ♦ Re: install.packages and dependencies=TRUE Answer to myself. 'dependencies' are Not used if
  • r cran r-forge share|improve this question asked Jan 5 '13 at 11:05 Mikael 195125 1 yes, list the other packages after Depends: in your DESCRIPTION file –Anthony Damico Jan 5
  • Top Login or register to post comments Copyright © 2007-2016 The OpenMx Project Search this site Recent Threads Power estimation for the detection of rG and rE Error Meesage from mxGenerateData
  • But now I've got where the problem is occurred.
  • This may mean that you have requested an impossible situation or if you are using the unstable distribution that some required packages have not yet been created or been moved out
  • If you want to use a different mirror, here they all are: https://cran.r-project.org/mirrors.html The above worked for me in getting R packages into an AWS EMR bootstrap shell script.
  • Hot Network Questions What is the difference between TeX and Texinfo?
  • Alternatively, you could create a local repo and put both bar and foo in, and then get the same behaviour. –Dirk Eddelbuettel Aug 2 '11 at 14:50 add a comment| up
  • Once you're looking at the contents of the folder, look for a file called "OpenMx" that has no file extension.
  • I updated the source as mentioned here - askubuntu.com/questions/218708/… and it worked. –gnjago Jun 5 '15 at 4:16 add a comment| 5 Answers 5 active oldest votes up vote 9 down

http://openmx.psyc.virginia.edu/svn/trunk/models/passing/IntroSEM-MultiR... SN74LS74AN trouble Choose the correct product notation or summation for the expression. How to make sure that my operating system is not affected by CVE-2016-5195? Install R Package From Source With Dependencies If you can, please manually install the following packages: ggplot2 ggthemes gplots parallel scales reshape gridExtra RColorBrewer gdata labeling RCircos As to the warning, please ignore chrUextra since we don't use

use tools::package_dependencies() to find the (non-recursive) dependencies. 3. If I list the other packages under the description using Depends or imports, will it be automatically installed with the new package? Please do it with install.packages with the option lib="/home/bli/src/piPipes/Rlib" If you cannot successfully install it, there might be issues with the R or the system. current community chat Stack Overflow Meta Stack Overflow your communities Sign up or log in to customize your list.

You signed out in another tab or window. Error : Package ‘ggplot2’ Was Found, But >= 2.0 Is Required By ‘hmisc’ See argument ‘dependencies’ of ‘install.packages’. The analysis will still run. > source('http://openmx.psyc.virginia.edu/getOpenMxBeta.R') Installing package into ‘M:/pc/Dokumenter/R/win-library/3.1’ (as ‘lib’ is unspecified) Warning: dependencies ‘digest’, ‘RcppEigen’ are not available trying URL 'http://openmx.psyc.virginia.edu/testing/bin/windows/contrib/3.1/OpenMx_2.0.0-3838.zip' Content type 'application/zip' length 3404044 bytes but there was no error for windows and mac OS.

R Install Package And All Dependencies

Installing from tarballs isn't a 'simple user' operation, so they're not spoonfed, and should be able to read error messages and your documentation. –Spacedman Aug 2 '11 at 19:36 What is the correct way to install a local package, so that its dependencies are pulled from CRAN? >> 2. R Cmd Install Dependencies However, if you'd like to check for yourself then you can run some models from our test suite. R Error Dependencies Are Not Available For Package I tried remove.packages("OpenMx"), but get the following message: Error in find.package(pkgs, lib) : there is no package called ‘OpenMx’.

I > also work in multiple builds of R pretty frequently, so I like to > install all my packages and commonly used ones from other people. You signed in with another tab or window. Strangely enough the package appears as installed: # dpkg --get-selections | grep ssl libssl0.9.8 install libssl1.0.0:amd64 install openssl install Any idea on what might be happening? Unpacking r-base (3.0.2-1ubuntu1) ... Package ‘ggplot2’ Is Not Available (for R Version 3.0.2) Ubuntu

Do primary and secondary coil resistances correspond to number of windings? sanjusebastian commented Jul 20, 2016 @Houd1ny May I know, what did you do to fix it? geneorama commented Jul 21, 2015 I had the same error, but for me just installing libssl-dev did the trick on Ubuntu anthony01 commented Jul 25, 2015 Thank you very much for When a girl mentions her girlfriend, does she mean it like lesbian girlfriend?

Here it is, with the names deleted. # Script to install current versions of commonly used packages installed <- rownames(installed.packages()) old <- old.packages() oldoptions <- options(repos = c(CRAN="http://probability.ca/cran",CRANextra="http://www.stats.ox.ac.uk/pub/RWin")) pkgs <- Install Ggplot2 Ubuntu It's safest to quit and restart R when you update a package that you've already loaded in that session (either that or do the update before calling library(OpenMx) t Top Login Done Selected version '1.10.1+dfsg-8+b6' (Debian:unstable [amd64]) for 'libgdal-dev' Some packages could not be installed.

I install it as a dependency of the rgdal R package. — Reply to this email directly or view it on GitHub <#124 (comment)>.

In addition: Warning messages: 1: In library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, : there is no package called ‘ggplot2’ 2: In install.packages(x, dep = TRUE, lib = Unix Exit Command Why don't cameras offer more than 3 colour channels? (Or do they?) Grep lines before after if value of a string is greater than zero How to flood From ?install.packages, dependencies argument: ‘TRUE’ means to use ‘c("Depends", "Imports", "LinkingTo", "Suggests")’ for ‘pkgs’ and ‘c("Depends", "Imports", Namespace ‘ggplot2’ Is Being Loaded, But >= 2.0.0 Is Required Done Some packages could not be installed.

How do I translate "hate speech"? So as I indicated: there can be errors if you automate things. DDoS: Why not block originating IP addresses? Top Login or register to post comments Mon, 10/27/2014 - 05:21 #6 karobro Offline Joined: 01/16/2013 Yes, I'm running windows.

Not used if repos = NULL. Done Building dependency tree Reading state information... Done Building dependency tree Reading state information... NATURE, Vol 445, p. > 228. > >> Prof.

Gabor On Tue, Dec 17, 2013 at 11:36 AM, Duncan Murdoch <[hidden email]> wrote: > On 17/12/2013 11:26 AM, Gábor Csárdi wrote: >> >> Dear all, >> >> I am trying Draw an ASCII-O'-Lantern for Halloween What's a Shady Word™? Reply to this email directly, view it on GitHub <#124 (comment)>, or mute the thread . -- http://carlboettiger.info eddelbuettel closed this Sep 7, 2016 Sign up for free to I had to install the following OpenSSL library sudo apt-get install libssl-dev and then I was able to start R and successfully install 'devtools' Many thanks to Dirk and Pascal for

share|improve this answer edited Jul 21 '15 at 21:44 answered Jun 13 '15 at 2:14 Jim O'Brien 4271211 1 Thanks for the solution! I have used junctions on Windows. (I know they do not always work on Windows, but they do on the Win 7 systems I use.) > > Duncan Murdoch > >> Hence R 3.0.2 is installed. This is described in section 1.1.1 of the Writing R extensions manual: http://cran.r-project.org/doc/manuals/R-exts.html#The-DESCRIPTION-file share|improve this answer answered Aug 2 '11 at 7:01 Andrie 102k19257333 1 I have the Depends field

Top Login or register to post comments Mon, 10/27/2014 - 13:55 #8 tbates Offline Joined: 07/31/2009 not looking in the right place for RcppEigen? Done Building dependency tree Reading state information... The default, ‘NA’, means ‘c("Depends", "Imports", "LinkingTo")’. ‘TRUE’ means (as from R 2.15.0) to use ‘c("Depends", "Imports", "LinkingTo", "Suggests")’ for ‘pkgs’ and ‘c("Depends", "Imports", "LinkingTo")’ for added dependencies: this installs all