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R Error Segfault From C Stack Overflow

Do you mind trying one more time if you can reproduce my error? > > Thanks, > > Brad > > > On Wed, Dec 25, 2013 at 11:06 AM, Wolfgang Reply With Quote Quick Navigation C++ (Non Visual C++ Issues) Top Site Areas Settings Private Messages Subscriptions Who's Online Search Forums Forums Home Forums Visual C++ & C++ Programming Visual C++ Now when the data size is too big . Some "tricks" worth knowing follow: 4.4.1 Finding entry points in dynamically loaded code 4.4.2 Inspecting R objects when debugging [ < ] [ > ] [ << ] [ Up

To start viewing messages, select the forum that you want to visit from the selection below. VariantFiltering: Installation segfault Hi, On one of my machines, the installation the 'VariantFiltering' package fails on both the lat... Read the compiler documentation. Robert R> SegInfo.BioHMM <- runBioHMM(MA.cgh2) sample is 1 Chromosomes: 1 2 Error: segfault from C stack overflow R> class(MA.cgh2) [1] "SegList" attr(,"package") [1] "snapCGH" R> dim(MA.cgh2$M) [1] 1967673 10 R> MA.cgh2

Thanks, Brad On Wed, Dec 25, 2013 at 11:06 AM, Wolfgang Huber wrote: > Dear Brad > > thank you for the feedback, much appreciated. The operation has been... sign up / log in • about • faq • rss Ask Question Latest News Jobs Tutorials Tags Users Ask View Latest News Jobs Tutorials Tags Users User Sign up Log I'm attaching it here.

How do I translate "hate speech"? I'm not suggesting you do that, but there is no C++ answer to that question. The fault is yours, not the third-party code. I can live with that.John__________________________________________________Do You Yahoo!?Tired of spam?

This can also be used to catch infinite loops or interrupt very long-running code. Regards, Paul McKenzie Reply With Quote March 31st, 2008,09:59 AM #3 vidhu View Profile View Forum Posts Member Join Date Apr 2002 Posts 35 Re: segfault from C stack overflow Thanks Browse other questions tagged r or ask your own question. is presumably only on your harddrive, but a similar piece of code (below) worked fine for me.

Rdatatable member arunsrinivasan commented Dec 1, 2014 Please read completely and follow the instructions here. Discontinuity in the angle of a complex exponential signal Can I only touch other creatures with spells such as Invisibility? I thought I copied the information to my previous email but here it is once again: ###################################################################### ########## R> SegInfo.BioHMM <- runBioHMM(MA.cgh2) sample is 1 Chromosomes: 1 2 Error: segfault from The soft limit tends to be smaller than the hard limit and is the only thing that can be increased.

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  2. Mail has the best spam protection aroundhttp://mail.yahoo.com Jose' Matos 2006-07-02 22:11:38 UTC PermalinkRaw Message Hello.  I see that the segfault only occurs when I tryto send a numpy matrix over to
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  4. The file appears to >> be written correctly since h5dump can read it. >> >> I got the same error with the same vector on both my mac laptop and our
  5. defect in bioconductor doc examples I am trying to work through the examples in, for example, C:\Program Files\R\rw1051\library\marra...

snapCGH package - processCGH Hello, I am doing some analysis of Agilent CGH and I found out that if I have some data without ... You might try installing latest R-devel, Bioconductor devel packages and see if the problem is reproducible there. > > I preprocessed the data according the snapCGH manual (snapCGHguide.pdf), > below is and termination of the R process after the second time. The segfault persists.

You signed out in another tab or window. The file appears to > > be written correctly since h5dump can read it. > > > > I got the same error with the same vector on both my mac I tried to > split the array according the chromosomes but it did not help. Are you able to obtain any details on where the segfault occurs?

Are the data too big? and return to R prompt after running the below code once, "Segmentation fault: 11? I thought I copied the information to my previous email but here it is once again: ###################################################################### ########## R> SegInfo.BioHMM <- runBioHMM(MA.cgh2) sample is 1 Chromosomes: 1 2 Error: segfault from Using multiple custom meta data keyword Criteria in a single query as LIKE operators How to make sure that my operating system is not affected by CVE-2016-5195?

Powered by Biostar version 2.2.0 Traffic: 247 users visited in the last hour I tried to > split the array according the chromosomes but it did not help. Yahoo!

snapCGH and Nimblegen arrays Dear All, I'm interested in identifying CNV regions using two Nimblegen arrays - both of which a...

node stack overflow Dear all, I am trying to use heatmap.2 in r to draw a heatmap for my dataset like this: heatmap... Terms Privacy Security Status Help You can't perform that action at this time. If anyone can make a suggestion how to get rhdf5 to read >> this without throwing the error I would appreciate it. I'm attaching it here.

Word for making your life circumstances seem much worse than they are Where's the 0xBEEF? NMF Package error I am getting following error while using plotting the calculated results from NMF package.   &... Error running TOMplot in WGCNA package Hi, This question may not be related to bioconductor, but I get an error running TOMplot in the ... Missing file in rhdf5 I got the following error while insdtalling the current bundle version of Bioconductor. [neuhau...

Any suggestion will be a help as I have no clue. I got the same error with the same vector on both my mac laptop and our linux server, in both cases using the latest version of rhdf5 (2.7.4). How to explain leaving a job for a huge ethical/moral issue to a potential employer - without REALLY explaining it How to copy with the last 1 with pattern matching method What is the reason for that error?